An Android-Based Mobile App (ARVPredictor) for the Detectio of HIV Drug-Resistance Mutations and Treatment at the Point of Care: Development Study
Date
2022Author
Ongadi, Beatrice
Lihana, Raphael
Kiiru, John
Ngayo, Musa
Obiero, George
Type
ArticleLanguage
enMetadata
Show full item recordAbstract
Background: HIV/AIDS remains one of the major global human health challenges, especially in resource-limited environments.
By 2017, over 77.3 million people were infected with the disease, and approximately 35.4 million individuals had already died
from AIDS-related illnesses. Approximately 21.7 million people were accessing ART with significant clinical outcomes. However,
numerous challenges are experienced in the delivery and accurate interpretation of data on patients with HIV data by various
health care providers at different care levels. Mobile health (mHealth) technology is progressively making inroads into the health
sector as well as medical research. Different mobile devices have become common in health care settings, leading to rapid growth
in the development of downloadable software specifically designed to fulfill particular health-related purposes.
Objective: We developed a mobile-based app called ARVPredictor and demonstrated that it can accurately define HIV-1
drug-resistance mutations in the HIV pol gene for use at the point of care.
Methods: ARVPredictor was designed using Android Studio with Java as the programming language and is compatible with
both Android and iOS. The app system is hosted on Nginx Server, and network calls are built on PHP’s Laravel framework
handled by the Retrofit Library. The DigitalOcean offers a high-performance and stable cloud computing platform for ARVPredictor.
This mobile app is enlisted in the Google Play Store as an “ARVPredictor” and the source code is available under MIT permissive
license at a GitHub repository. To test for agreement between the ARVPredictor and Stanford HIV Database in detecting HIV
subtype and NNRT and NRTI mutations, a total of 100 known HIV sequences were evaluated.
Results: The mobile-based app (ARVPredictor) takes in a set of sequences or known mutations (protease, reverse transcriptase
and integrase). It then returns inferred levels of resistance to selected nucleoside, nonnucleoside protease, and integrase inhibitors
for accurate HIV/AIDS management at the point of care. The ARVPredictor identified similar HIV subtypes in 98/100 sequences
compared with the Stanford HIV Database (κ=0.98, indicating near perfect agreement). There were 89/100 major NNRTI and
NRTI mutations identified by ARVPredictor, similar to the Stanford HIV Database (κ=0.89, indicating near perfect agreement).
Eight mutations classified as major by the Stanford HIV Database were classified as others by ARVPredictor.
Conclusions: The ARVPredictor largely agrees with the Stanford HIV Database in identifying both major and minor proteases,
reverse transcriptase, and integrase mutations. The app can be conveniently used robustly at the point of care by HIV/AIDS care
providers to improve the management of HIV infection
URI
https://formative.jmir.org/2022/2/e26891/metricshttp://erepository.uonbi.ac.ke/handle/11295/156033
Citation
Ongadi B, Lihana R, Kiiru J, Ngayo M, Obiero G An Android-Based Mobile App (ARVPredictor) for the Detection of HIV Drug-Resistance Mutations and Treatment at the Point of Care: Development Study JMIR Form Res 2022;6(2):e26891 doi: 10.2196/26891 PMID: 35107425Publisher
University of Nairobi
Rights
Attribution-NonCommercial-NoDerivs 3.0 United StatesUsage Rights
http://creativecommons.org/licenses/by-nc-nd/3.0/us/Collections
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